BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B03LP1|AL428843
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig925 1496 0.0
3x_Contig1651 105 2e-22
>3x_Contig925
Length = 3823
Score = 1496 bits (743), Expect = 0.0
Identities = 780/803 (97%), Gaps = 2/803 (0%)
Strand = Plus / Plus
Query: 73 cgataccctcagacactttaccacgcgcaactgacaaaagaatggctcctcgtccgttag 132
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6 cgattccctcagacactttaccacgcgcaactgacaaaagaa-ggctcctcgtccgttag 64
Query: 133 aacaggccttacggtatgtttccaatgctaaagcagtttcttgtgcatcgggagtttcca 192
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aacaggc-ttacggtatgtttccaatgctaaagcagtttcttgtgcatcgggagtttcca 123
Query: 193 ctaagatcaatttgtatttccaaacctcatctagaatacccatagtttgccacattgaaa 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctaagatcaatttgtatttccaaacctcatctagaatacccatagtttgccacattgaaa 183
Query: 253 taatggattccatgtataartdagatgggaaarrdacgaccaaaccatcgggtgtgattt 312
||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||
Sbjct: 184 taatggattccatgtataaataagatgggaaaaaaacgaccaaaccatcgggtgtgattt 243
Query: 313 tggcaaattcaaccaacatcgaaccatagttacgaacaatggaaggrtcatttctrattt 372
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 244 tggcaaattcaaccaacatcgaaccatagttacgaacaatggaaggatcatttctaattt 303
Query: 373 cgaatctagatgatattgccacttgatcagaaccctttgttaaratcattggcaagartg 432
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 304 cgaatctagatgatattgccacttgatcagaaccctttgttaaaatcattggcaagaatg 363
Query: 433 attttktcgctaaagtcatcgaataagattgttgtratacagtttcgaratttracatct 492
||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||
Sbjct: 364 attttttcgctaaagtcatcgaataagattgttgtaatacagtttcgaaatttaacatct 423
Query: 493 tagggtacatatccaacggggatatggtacccgaagtgataatraccgatgagaatcgtt 552
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 424 tagggtacatatccaacggggatatggtacccgaagtgataataaccgatgagaatcgtt 483
Query: 553 cgaagataggtttrattgcratcgatgcgtcaagacaagtaaatctaacgattggrttgg 612
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 484 cgaagataggtttaattgcaatcgatgcgtcaagacaagtaaatctaacgattggattgg 543
Query: 613 gcactgccgcattttcgatttcatacggttctatratcragaggaacccatcctcataag 672
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 544 gcactgccgcattttcgatttcatacggttctataatcaagaggaacccatcctcataag 603
Query: 673 tagaaatcaaagtagcaaaagttgcaatgtctttcaaagcgttaaattcttccacttcct 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tagaaatcaaagtagcaaaagttgcaatgtctttcaaagcgttaaattcttccacttcct 663
Query: 733 cgacttcaagggtcctaaccaataacgacaatctttctgaacaaaatcgtaaaggtttcc 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cgacttcaagggtcctaaccaataacgacaatctttctgaacaaaatcgtaaaggtttcc 723
Query: 793 tttctataaatgtyaattgtttgagatgaaggaggaaagagtttggtgtctccgatatga 852
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tttctataaatgtcaattgtttgagatgaaggaggaaagagtttggtgtctccgatatga 783
Query: 853 catgtaaaaccttcattctagtc 875
|||||||||||||||||||||||
Sbjct: 784 catgtaaaaccttcattctagtc 806
>3x_Contig1651
Length = 13087
Score = 105 bits (52), Expect = 2e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 3 atacgagattctgtatactggaacggaatgccgatcatgagtacagttcttccgta 58
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 56 atacgagattctgtatactggaacggaatgccgatcatgagtacagttctttcgta 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4910
Number of Sequences: 1807
Number of extensions: 4910
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 2
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)